Beside the Mountain

  • All Recipes
  • About
  • My Pantry
menu icon
go to homepage
  • All Recipes
  • About
  • My Pantry
subscribe
search icon
Homepage link
  • All Recipes
  • About
  • My Pantry
×
Home » Recipes » Baking

Healthy Blackberry Muffins (with Homemade Oat Flour)

Updated: Jan 29, 2026 · Published: Jul 14, 2023 by Danika Vanderpyl · This post may contain affiliate links · 8 Comments

Jump to Recipe Print Recipe

When I realized I could blend oats into flour and bake with it, I was so excited to create healthy gluten-free treats like these blackberry muffins! After multiple tests, I am happy to share how to take rolled oats and bake them into these delicious, healthy muffins with chunks of berry in every bite (no other flour needed)!

You can use fresh seasonal blackberries or frozen blackberries (with extra berries make this blackberry smoothie!). These muffins are easy and quick to make, perfect for breakfast or to pack along for a snack! Just like my hemp orange muffins with oat flour!

Love this recipe because:

  • These muffins are healthy yet soo tasty, they are low in sugar (and can be made with honey), high in fiber, and have 5 grams of protein each!
  • They are perfect for special dietary needs as they are gluten-free, and dairy-free and can be made with honey instead of cane sugar.
  • It's a perfect way to enjoy seasonal fruit (blackberries), just like this recipe with seasonal rhubarb - rhubarb muffins, or another berry muffin like these healthy blueberry muffins.
  • These fruity muffins are loved by all kids and toddlers, just like my orange muffins or banana whole wheat muffins.
  • Using oat flour is an awesome alternative to get grains into your diet, change up the breakfast oatmeal, and make something gluten-free.
Jump to:
  • Love this recipe because:
  • Ingredients
  • Oat flour
  • Step-by-step instructions for blackberry muffins
  • Danika's tips for the best muffins
  • Substitution and variations
  • Danika's nutrition insight + protein boost
  • Healthy baked snacks
  • Healthy Blackberry Muffins

Ingredients

Eggs, vanilla, applesauce, oil, cane sugar, baking soda, sea salt, oat flour, frozen blackberries ready to make muffins.
  • Oat flour: You can easily make your own (like me) by putting rolled oats into the blender and pulsing until fine flour. These muffins are just another way of having oatmeal!
  • Blackberries: You can use fresh or frozen blackberries for this recipe! If you are using frozen blackberries, leave them in the freezer until you add them to the muffin batter. Alternatively, you can add other types of berries to suit your preference and what you have available. Look for dark, plump blackberries! When picking (either from the store or from the bush), choose ones that are dark black and purple rather than red.
  • Apple sauce: This increases the moisture in the muffins and using this instead of perhaps yogurt or milk makes them dairy-free.
  • Eggs: Eggs support the texture and the rise of the muffin.
  • Oil: Oil supports the crumb and the texture of the muffins.
  • Cane sugar: You can use cane sugar, white sugar, brown sugar, or honey to sweeten these muffins! I also tested these muffins with truvia sweetener, and that worked well!
  • Vanilla: Oh this is the best flavour boost in these amazing muffins. Alternatively, you could use the almond extract to make a tasty flavour!
  • Baking powder and sea salt: You will need baking powder (not baking soda) to make these muffins rise! Sea salt enhances the flavor.

Oat flour

Where do I get oat flour? You can buy it from grocery stores that sell more healthy items or in the baking aisle. Or buy oat flour online from organic matter, one of my go to stores! Or you can make your own!

How do I make oat flour? What kind of oats do I use? To make oat flour, place rolled oats, quick oats, or steel-cut oats into a good blender or food processor, and blend for 1-5 minutes until it resembles thin flour.

Can substitute oat flour 1:1 for all-purpose flour in muffins? No, it's best not to use oat flour instead of regular flour. It can be slightly tricky to get the right ratio as oat flour absorbs a lot of liquid, and if it sits too long before baking, it becomes crumbly. It is best to follow recipes that specifically call for oat flour if you would like to use more of it!

Is oat flour gluten-free? To ensure oat flour is gluten-free, use gluten-free oats. Oats do not contain gluten; however, they are often processed in a facility where they come in contact with gluten.

Step-by-step instructions for blackberry muffins

Follow the photos from my kitchen to make oat flour muffins. See the recipe card below for exact ingredient details.

Rolled oats in the blender to make oat flour.

Make oat flour: Place rolled oats in the blender and pulse until a thin sand-like texture forms.

Mix dry ingredients: In a bowl, mix the dry ingredients - oat flour, sea salt, and baking powder and combine well.

Mixing eggs, oil, vanilla, cane sugar, applesauce, in a glass bowl.

Mix wet ingredients: In another mixing bowl, place the applesauce, eggs, cane sugar, vanilla and oil. Whisk together until everything is mixed.

Wet ingredients well mixed, with the blackberries and flour ready to be mixed in.

Fold batter together: Dump the flour mix and the blackberries into the egg mixture. Use a spatula to stir the batter together, about 12 folds, just until everything is incorporated. Do not over-stir.

Muffin batter in greased muffin tray with blackberries on top.

Scoop & bake: Add about ⅓ cup of batter to fill each muffin cup. Put blackberries on top of each muffin as desired. Place the muffin tin in the preheated oven (375 Fahrenheit (190 °C)) to bake for 18-20 minutes. Remove muffins from the oven when they spring back from the touch and when the center does not look gooey.

Danika's tips for the best muffins

Measuring Flour: The amount of oat flour can greatly impact the recipe. To get just the right amount, spoon the oat flour into the measuring cup instead of scooping it, as this compacts it. Or weigh to measure, you want 180 grams.

Don't let the batter sit: Make sure to put the muffins in the oven right away. If they sit too long on the counter, the moisture will absorb, and the muffins will become crumbly.

Frozen blackberries: If you are using frozen blackberries (instead of fresh) leave them in the freezer right until you add them to the mixing bowl.

Cut the blackberries: If you want more evenly distributed blackberries, you can cut the large berries in half before adding them.

Blackberry muffins in a bowl with more muffins and fresh blackberries on the counter.

Substitution and variations

Here are a few ways you can change this healthy recipe to make it suit your preferences!

  • Use other berries: Instead of blackberries, try this recipe with blueberries, raspberries, or chopped strawberries to make healthy oat flour fruit muffins!
  • Chocolate chips: Add ½ cup of chocolate chips to have blackberry chocolate chip muffins!
  • Mini toddler-friendly: Bake these muffins in a mini muffin tray to make every toddler squeal!

Danika's nutrition insight + protein boost

Since doing schooling in nutrition I love to add some nutritional insight to the recipes I create. Let's chat about these healthy berry muffins!

Key nutrients of blackberries are: fiber, vitamin C, magnesium, phosphorus, and zinc.

These oat flour muffins are high in fibre from the oats, apple sauce, and blackberries. There are 5 grams per muffin of protein from the oats and eggs.

To make it more protein-dense: add ⅓ cup hemp hearts to the flour before mixing the muffins all together. Increasing the muffins to 8 grams of protein each. This will make the flavor a bit more nutty tasting.

Blackberry muffins in a serving bowl with fresh blackberries in the bowl.
Are blackberry oat flour muffins healthy?

Yes! These muffins are nutrient-dense, containing good fibre from the blackberries and oats, they are also low in sugar. They contain 5 grams of protein from the eggs and oats (you can add hemp hearts to increase the protein). These healthy muffins are a great way to include another grain - oats (instead of classic gluten), as well as seasonal fruit into your everyday diet.

Can I use frozen blackberries in muffins?

Yes! You can use frozen blackberries in muffins. Do not defrost them first as they will make your muffins with purple streaks, as well as make them more liquidy. Add frozen blackberries to the muffins frozen right from the freezer.

Healthy baked snacks

For other gluten-free muffins, try these chocolate chip protein muffins.

  • Brown rough crispy homemade cracker pieces.
    High-Protein Crackers
  • Brown banana protein muffins with chocolate chips sitting on a cooling rack beside a plate of chocolate chip muffins.
    Protein Banana Muffins with Oats
  • A chunk of granola with oats and hemp hearts.
    Hemp Granola
  • A brown muffins with green flecks on a cutting board.
    Healthy Zucchini Muffins with Yogurt
See more Baking →

❤️ Like this recipe for healthy blackberry muffins? Leave a comment and give this recipe a star rating. I love hearing from you, and it helps others make the recipe!

Fresh baked healthy gluten free blackberry muffins in a serving bowl, with fresh blackberries on the counter.

Healthy Blackberry Muffins

Danika Vanderpyl
Learn to make healthy blackberry muffins by grinding up rolled oats into flour for the base, making fluffy, moist and gluten-free muffins.
5 from 3 votes
Print Recipe Pin Recipe
Prep Time 15 minutes mins
Cook Time 20 minutes mins
Total Time 35 minutes mins
Course Breakfast, Dessert, Snack
Cuisine American
Servings 12 muffins
Calories 232 kcal

Equipment

  • 1 12-cup muffin pan

Ingredients
  

Dry Ingredients

  • 2 cups rolled oats/oat flour (180 grams)
  • 2 teaspoon baking powder
  • ¼ teaspoon sea salt

Wet Ingredients

  • ¾ cup applesauce
  • 3 eggs
  • 4 tablespoon oil
  • ½ cup cane sugar or brown sugar, truvia, or honey
  • 1 teaspoon vanilla
  • 2 cups blackberries fresh (288 g) or frozen

Optional:

  • ½ cup hemp hearts to increase protein, and nutrient density

Instructions
 

  • Prepare your muffin pan by greasing each cup or placing muffin liners inside. Preheat the oven to 375 degree Fahrenheit (190 C). This is important to start with, as you don't want the batter to sit too long.
  • Make your own oat flour: Place 2 cups of rolled oats into a blender or food processor. Blend for 2-4 minutes until it becomes a sandy-like powder.
  • Whisk together the dry ingredients, the oat flour, baking powder, and sea salt. For more protein, add ⅓ cup hemp hearts.
  • In another large bowl mix together the applesauce, eggs, oil, sweetener of choice, and vanilla until well combined.
  • Pour the dry flour mix into the wet egg mixture, and add half the blackberries. Stir together just until mixed. Put batter into the muffin pan: a little less than ⅓ cup each to make 12 muffins. Distribute the leftover blackberries on top of the muffin batter.
  • Right away, place the muffins into the oven 375 degrees Fahrenheit (190 C) for 18-20 minutes until cooked (they will spring back to the touch). Let them cool for a few minutes before removing them from the pan.

Notes

Optional: Cut large blackberries in half to have evenly distributed berries throughout the muffins.
If using frozen blackberries, don't let them thaw; take them right from the freezer when adding them to the mixing bowl.
Storage: Muffins will last 3 days on the counter, then place them in the fridge for another 3-4 days. Or freeze, they will last at least 3-6 months this way.

Nutrition

Serving: 1muffinCalories: 232kcalCarbohydrates: 26gProtein: 8gFat: 11gSaturated Fat: 1gPolyunsaturated Fat: 5gMonounsaturated Fat: 4gTrans Fat: 0.02gCholesterol: 41mgSodium: 139mgPotassium: 143mgFiber: 3gSugar: 11gVitamin A: 158IUVitamin C: 5mgCalcium: 76mgIron: 2mg
Keyword Baking, Blackberries, Dairy Free, Gluten Free, Muffins, Oat flour, Seasonal Fruit
Did you love this recipe?Make sure to leave a comment below!

More Baking

  • Toddler poking a finger at a brown glazed apple bundt cake.
    Apple Snack Cake
  • A banana on a cooling rack with vegan oatmeal chocolate chip cookies.
    Banana Oatmeal Chocolate Chip Cookies
  • A basket with a tea towel with muffins that have chocolate chips on top/
    Chocolate Chip Protein Muffins
  • A gluten free brownie made with dates and cocoa powder with chocolate chips on top.
    Date Brownie (No Flour + Date-Sweetened)

Comments

    5 from 3 votes (1 rating without comment)

    Leave a Reply Cancel reply

    Your email address will not be published. Required fields are marked *

    Recipe Rating




  1. Kate says

    September 30, 2024 at 1:31 pm

    I have just made these tonight to use up some eggs and they are delicious. I used brown sugar and EVOO because that was what I had it and they were great. Thank yoi

    Reply
    • Danika Vanderpyl says

      October 01, 2024 at 6:33 am

      Kate - so great to here these did well with your adjustments! Enjoy the muffins. 🙂

      Reply
  2. Becky says

    January 08, 2024 at 4:49 pm

    5 stars
    Love these! Made these with a gluten free flour blend as it was what I had on hand, still turned out great!

    Reply
    • Danika Vanderpyl says

      January 08, 2024 at 8:21 pm

      Yay glad you enjoyed this recipe!

      Reply
  3. Lovely Goosen says

    August 08, 2023 at 4:34 pm

    I enjoyed this! So delicious and healthy! My 2yr old son loved it as he blackberries are his favourite.

    Reply
    • danikavanderpyl says

      August 09, 2023 at 6:07 am

      Love hearing this Lovely! The littles always love the berries don't they?! Awesome to hear.

      Reply
  4. Naomi says

    August 08, 2023 at 6:54 am

    5 stars
    I made these with blueberries instead of blackberries but they were still delicious. Very moist. I was able to keep them in the fridge for almost 2 weeks with no issues.
    I'll be making these again.

    Reply
    • danikavanderpyl says

      August 08, 2023 at 7:06 am

      Naomi! Glad you enjoyed these, great to hear they lasted two weeks!

      Reply
Danika-vanderpyl-hiking-with-mountains

Hey hey! I'm Danika.

I'm certified in holistic nutrition and I create snack recipes! Because unprocessed, wholesome, nutrient-dense snacks are hard to find but I want everyone to know they are easy to make!

About me

Popular

  • A brown energy balls sitting in a small bowl filled with hemp hearts.
    Protein Balls without Protein Powder
  • Chocolate covered ice cream bars dipped in nuts.
    Chocolate Covered Ice Cream Bars (Healthy Dairy-Free Recipe)
  • A close up of a morning glory muffin with toasted coconut on top.
    Morning Glory Muffins with Pineapple
  • A scoop of cookie dough light brown with flecks of chocolate chips in it, in a light blue pottery bowl.
    Healthy Edible Cookie Dough

Footer

↑ back to top

Info

  • About
  • Contact
  • Work With Me
  • Privacy Policy

Newsletter

  • Sign Up! for snack recipes and inspo

Recipes

  • Smoothies
  • Adventure Friendly Snacks
  • Baking
  • No Bake

Copyright © 2026 BesidetheMountain

As an Amazon Associate, I earn from qualifying purchases.

Blackberry muffins in a bowl with more muffins and fresh blackberries on the counter.
Pale brown muffins with two dark blackberries on the top, sitting in a serving bowl.
Pale brown muffins in a bowl with red blackberries.

Rate This Recipe

Your vote:




A rating is required
A name is required
An email is required

Recipe Ratings without Comment

Something went wrong. Please try again.